This whole claim that she "got more votes" is a complete failure of logic anyways. If the hypothesis is that "More folks voted Hillary" --- that's actually blatantly FALSE. Because anyone saying that is disenfranchising the large 4.2% of the vote that went to Stein and Johnson. Remember them? They got votes also. And THOSE votes were on principles and AGAINST the 2 major power whores.
So Hilliary got 48% of the vote and 52% of the people VOTED AGAINST HER...
(FCT certified Fact-Checked estimate) 
In the future, the brand name candidates will be getting less and less of the total. It's a definite trend. So soon, you partisans will be arguing about "consensus" and "plurality" when your candidates have 60% or 70% of America voting against them.
Now -- if you're really desperate and butt-hurt --- You could have a NEW hypothesis to test. Which is "In a 2 way race between JUST Clinton and Trump -- Clinton won" .. Problem with that hypothesis is -- we did NOT HAVE a 2 way race. So you'd have to analyze and see how that the 4.2% WOULD have voted in a 2 way race. Not likely to be convincing. Since her current 0.7% "margin" over Trump COULD BE because Trump suffered 0.7% more by the presence of OTHER CHOICES on the ballot. And my educated guess is that MOST of that 4.2% that the Dems don't want to recognize ---- just would have stayed home. But there's enough votes in that bundle to AFFECT the pop vote outcome. EVEN WITH --- illegals voting in Cali. Or any of the other "excuses".
She didn't "WIN" the popular vote. More folks voted AGAINST HER then FOR HER... By far...
Math is hard!
It's logic and being adapt at answering questions with math that matters. And if you're gonna claim "the popular vote" -- you have to include ALL of it. Basic logic and reason. Math is useless without it.
52% voted for someone else. In the near future -- that could 60% or 65%. So claiming pop vote victory under those circumstances is gonna look ridiculous -- isn't it? And that's ANOTHER reason for the electoral college. America wasn't designed for just 2 dynasty parties.
No. She won more votes than anyone else.
Basic math.
She got more votes than Donald, but not more pop votes than the ones that were cast for ALL the other choices. You have no idea what a race without 4 choices would have looked it. You can't invent the data for it.. 52% of voters DID NOT CHOOSE HER... Don't disenfranchise them.
What you are doing with this pop vote thing -- is trying to convince yourself that she got more votes than the competitive field. MY vote was not for Hillary or Trump --- and it matters 5 times more in the statistics than what you are claiming "her margin of victory" was.
The pop vote was NOT a 2 way race.